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Warning

Iceberg reaches end-of-life on 30th November 2020. If you are running jobs on Iceberg then you need to take urgent action to ensure that your jobs/scripts will run on ShARC or Bessemer. If you have never used ShARC or Bessemer then now is the time to test your scripts. Not all software on Iceberg is available on ShARC/Bessemer.

ITK-SNAP

ITK-SNAP is a software application used to segment structures in 3D medical images.

Usage

The lastest version of ITK-SNAP can be activated using the module file:

module load apps/binapps/itksnap

Alternatively, you can load a specific version of ITK-SNAP:

module load apps/binapps/itksnap/3.6

Installation notes

ITK-SNAP was compiled using the install_itksnap.sh script, the module file is 3.6.