Iceberg was decommissioned on 30th November 2020. Users of Iceberg need to switch to using ShARC and/or Bessemer instead.
Phyluce (phy-loo-chee) is a software package that was initially developed for analyzing data collected from ultraconserved elements in organismal genomes.
Phyluce can be activated using the module file:
module load apps/binapps/phyluce/1.5.0
Phyluce makes use of the
apps/python/conda module, therefore this module will be loaded by loading Phyluce.
As Phyluce is a Python package your default Python interpreter will be changed by loading Phyluce.
$ module load apps/python/conda $ conda create -p /usr/local/packages6/apps/binapps/conda/phyluce python=2 $ source activate /usr/local/packages6/apps/binapps/conda/phyluce $ conda install -c https://conda.binstar.org/faircloth-lab phyluce
This installs Phyluce as a conda environment in the
which is then loaded by the module file
which is a modification of the anaconda module files.