Warning

Iceberg reaches end-of-life on 30th November 2020. If you are running jobs on Iceberg then you need to take urgent action to ensure that your jobs/scripts will run on ShARC or Bessemer. If you have never used ShARC or Bessemer then now is the time to test your scripts. Not all software on Iceberg is available on ShARC/Bessemer.

ResMap¶

ResMap (Resolution Map) is a software package for computing the local resolution of 3D density maps studied in structural biology, primarily electron cryo-microscopy.

Making ResMap available¶

The following module command makes the latest version of gemini available to your session

module load apps/binapps/resmap

Alternatively, you can make a specific version available

module load apps/binapps/resmap/1.1.4

Installation notes¶

These are primarily for system administrators.

ResMap was installed as a precompiled binary from https://sourceforge.net/projects/resmap/files/ResMap-1.1.4-linux64/download

Modulefile¶

The module file is on the system at /usr/local/modulefiles/apps/binapps/1.1.4

The contents of the module file is

#%Module1.0#####################################################################
##
## ResMap module file
##

## Module file logging
source /usr/local/etc/module_logging.tcl
##

proc ModulesHelp { } {
    global bedtools-version

    puts stderr "   Adds `ResMap-$resmapversion' to your PATH environment variable"
}

set resmapversion 1.1.4

prepend-path PATH /usr/local/packages6/apps/binapps/resmap/$resmapversion/