BioPerl

Bioperl is the product of a community effort to produce Perl code which is useful in biology. Examples include Sequence objects, Alignment objects and database searching objects.

Note

This is an autogenerated page, more detail including examples may be available for this package. Please see the first section of Software on Stanage

After connecting to Stanage (see Establishing a SSH connection), start an interactive session with the following command:

srun --pty bash -i

A version of BioPerl can then be made available with one of the following:

module load BioPerl/1.7.8-GCCcore-12.2.0

Notes

BioPerl was installed using Easybuild, build details can be found in $EBROOTBIOPERL/easybuild with a given module loaded.

Dependencies for latest version of BioPerl