Biopython

Biopython is a set of freely available tools for biological computation written in Python by an international team of developers. It is a distributed collaborative effort to develop Python libraries and applications which address the needs of current and future work in bioinformatics.

Note

This is an autogenerated page, more detail including examples may be available for this package. Please see the first section of Software on Stanage

After connecting to Stanage (see Establishing a SSH connection), start an interactive session with the following command:

srun --pty bash -i

A version of Biopython can then be made available with one of the following:

module load Biopython/1.79-foss-2022a

Notes

Biopython was installed using Easybuild, build details can be found in $EBROOTBIOPYTHON/easybuild with a given module loaded.

Dependencies for latest version of Biopython