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Advance Notice: Bessemer will be retired at the end of the day on Friday 31st October 2025.

Trinity

Trinity represents a novel method for the efficient and robust de novo reconstruction of transcriptomes from RNA-Seq data. Trinity combines three independent software modules: Inchworm, Chrysalis, and Butterfly, applied sequentially to process large volumes of RNA-Seq reads.

Note

This is an autogenerated page, more detail including examples may be available for this package. Please see the first section of Software on Stanage

After connecting to Stanage (see Establishing a SSH connection), start an interactive session with the following command:

srun --pty bash -i

A version of Trinity can then be made available with one of the following:

module load Trinity/2.15.1-foss-2022a

Notes

Trinity was installed using Easybuild, build details can be found in $EBROOTTRINITY/easybuild with a given module loaded.

Direct dependencies for latest version of Trinity