HH-suite

The HH-suite is an open-source software package for sensitive protein sequence searching based on the pairwise alignment of hidden Markov models (HMMs).

Note

This is an autogenerated page, more detail including examples may be available for this package. Please see the first section of Software on Stanage

After connecting to Stanage (see Establishing a SSH connection), start an interactive session with the following command:

srun --pty bash -i

A version of HH-suite can then be made available with one of the following:

module load HH-suite/3.3.0-gompi-2022a

Notes

HH-suite was installed using Easybuild, build details can be found in $EBROOTHHMINSUITE/easybuild with a given module loaded.

Dependencies for latest version of HH-suite