Attention

The Bessemer HPC service was decommissioned on 2025-10-31 and can no longer be accessed by users. Removal of Bessemer references in our documentation is ongoing

PLINK

PLINK is a free, open-source whole genome association analysis toolset, designed to perform a range of basic, large-scale analyses in a computationally efficient manner.

Note

This is an autogenerated page, more detail including examples may be available for this package. Please see the first section of Software on Stanage

After connecting to Stanage (see Establishing a SSH connection), start an interactive session with the following command:

srun --pty bash -i

A version of PLINK can then be made available with one of the following:

module load PLINK/2.00a3.7-foss-2022a

Notes

PLINK was installed using Easybuild, build details can be found in $EBROOTPLINK/easybuild with a given module loaded.