Attention

Advance Notice: Bessemer will be retired at the end of the day on Friday 31st October 2025.

GMAP-GSNAP

GMAP: A Genomic Mapping and Alignment Program for mRNA and EST Sequences GSNAP: Genomic Short-read Nucleotide Alignment Program

Note

This is an autogenerated page, more detail including examples may be available for this package. Please see the first section of Software on Stanage

After connecting to Stanage (see Establishing a SSH connection), start an interactive session with the following command:

srun --pty bash -i

A version of GMAP-GSNAP can then be made available with one of the following:

module load GMAP-GSNAP/2023-02-17-GCC-11.3.0

Notes

GMAP-GSNAP was installed using Easybuild, build details can be found in $EBROOTGMAPMINGSNAP/easybuild with a given module loaded.

Direct dependencies for latest version of GMAP-GSNAP